BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C10LP1|AL429041
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1793 0.0
>3x_Contig1758
Length = 25930
Score = 1793 bits (904), Expect = 0.0
Identities = 905/906 (99%)
Strand = Plus / Plus
Query: 1 gatccataaacaaatcctaaatccaatggctattcaattgctaaggggtcaattgagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 gatccataaacaaatcctaaatccaatggctattcaattgctaaggggtcaattgagaca 1163
Query: 61 cgaggagactgtaaatgtggttattgaagatagcaagttagtggttaaaccaaaccacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 cgaggagactgtaaatgtggttattgaagatagcaagttagtggttaaaccaaaccacga 1223
Query: 121 tcccgaatcaagtgaactcggaaatgacaagcaagctgatgttgagtaaatctcgttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 tcccgaatcaagtgaactcggaaatgacaagcaagctgatgttgagtaaatctcgttgaa 1283
Query: 181 cacccgcaattgctaactctccagcgtaatgatcgatattcttgactttctgtgcgtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 cacccgcaattgctaactctccagcgtaatgatcgatattcttgactttctgtgcgtttc 1343
Query: 241 cactgaattcctaaattatgcacccttgttagaccgccccggtagtaattcgataataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 cactgaattcctaaattatgcacccttgttagaccgccccggtagtaattcgataataat 1403
Query: 301 attacggactgctttatggccaaatattaaacttttatacatgtaaatacgtaccaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 attacggactgctttatggccaaatattaaacttttatacatgtaaatacgtaccaagat 1463
Query: 361 gatgcaatcaatatatgagacatggacttttaggcaaggtcagctcaattgacctcttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 gatgcaatcaatatatgagacatggacttttaggcaaggtcagctcaattgacctcttta 1523
Query: 421 cttttgatggcggctagaagatataaagccaaatgtgattaactatgcctatgaatatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 cttttgatggcggctagaagatataaagccaaatgtgattaactatgcctatgaatatta 1583
Query: 481 tatattagttacaaattgcgattaagtcgagttatcggttaaatttgctttttcttttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 tatattagttacaaattgcgattaagtcgagttatcggttaaatttgctttttcttttag 1643
Query: 541 cttcattaattgtaactcagttaatctgataacctcttttaaattttgcttcttatgttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 cttcattaattgtaactcagttaatctgataacctcttttaaattttgcttcttatgttc 1703
Query: 601 cacagctttgtttaaaggaatagtactgtttatattgtaattgacatctaaattcggtcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 cacagctttgtttaaaggaatagtactgtttatattgtaattgacatctaaattcggtcc 1763
Query: 661 agattttttgtttagttccgagccgctgtgtgaatcaatccaattccatagatcatattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 agattttttgtttagttccgagccgctgtgtgaatcaatccaattccatagatcatattc 1823
Query: 721 agaatcagaataaagtttactgaatggcttatttttattaccacgcctattccttccata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 agaatcagaataaagtttactgaatggcttatttttattaccacgcctattccttccata 1883
Query: 781 atacgtttccatggcaggcagaacatagtactcctccccgtccataacaattgtactggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 atacgtttccatggcaggcagaacatagtactcctccccgtccataacaattgtactggg 1943
Query: 841 actaacgaaatgaggsgatgggcttctgtggaataaactcgaacagagtctagggacaaa 900
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 actaacgaaatgaggcgatgggcttctgtggaataaactcgaacagagtctagggacaaa 2003
Query: 901 tatgat 906
||||||
Sbjct: 2004 tatgat 2009
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6617
Number of Sequences: 1807
Number of extensions: 6617
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)